David Rodriguez-Larrea : rechercher sur Z-Library

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1

Using multi-objective computational design to extend protein promiscuity

Maria Suarez, Pablo Tortosa, Maria M. Garcia-Mira, David Rodríguez-Larrea, Raquel Godoy-Ruiz, Beatriz Ibarra-Molero, Jose M. Sanchez-Ruiz, Alfonso Jaramillo

Journal:

Biophysical Chemistry

Année:

2010

Langue:

english

Fichier:

PDF, 720 KB

english, 2010

2

Beyond Lumry–Eyring: An unexpected pattern of operational reversibility/irreversibility in protein denaturation

David Rodriguez-Larrea, Beatriz Ibarra-Molero, Leonardo de Maria, Torben V. Borchert, Jose M. Sanchez-Ruiz

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2008

Langue:

english

Fichier:

PDF, 253 KB

english, 2008

3

Engineering proteins with tunable thermodynamic and kinetic stabilities

Angel L. Pey, David Rodriguez-Larrea, Susanne Bomke, Susanne Dammers, Raquel Godoy-Ruiz, Maria M. Garcia-Mira, Jose M. Sanchez-Ruiz

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2008

Langue:

english

Fichier:

PDF, 283 KB

english, 2008

4

Protein–protein interactions at an enzyme–substrate interface: Characterization of transient reaction intermediates throughout a full catalytic cycle of Escherichia coli thioredoxin reductase

Ana Negri, David Rodríguez-Larrea, Esther Marco, Antonio Jiménez-Ruiz, José M. Sánchez-Ruiz, Federico Gago

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2010

Langue:

english

Fichier:

PDF, 505 KB

english, 2010

5

Diversity of chemical mechanisms in thioredoxin catalysis revealed by single-molecule force spectroscopy

Perez-Jimenez, Raul, Li, Jingyuan, Kosuri, Pallav, Sanchez-Romero, Inmaculada, Wiita, Arun P, Rodriguez-Larrea, David, Chueca, Ana, Holmgren, Arne, Miranda-Vizuete, Antonio, Becker, Katja

Journal:

Nature Structural and Molecular Biology

Année:

2009

Langue:

english

Fichier:

PDF, 564 KB

english, 2009

6

Diversity of chemical mechanisms in thioredoxin catalysis revealed by single-molecule force spectroscopy

Perez-Jimenez, Raul, Li, Jingyuan, Kosuri, Pallav, Sanchez-Romero, Inmaculada, Wiita, Arun P, Rodriguez-Larrea, David, Chueca, Ana, Holmgren, Arne, Miranda-Vizuete, Antonio, Becker, Katja

Journal:

Nature Structural and Molecular Biology

Année:

2009

Langue:

english

Fichier:

PDF, 134 KB

english, 2009

7

Role of Solvation Barriers in Protein Kinetic Stability

David Rodriguez-Larrea, Stefan Minning, Torben V. Borchert, Jose M. Sanchez-Ruiz

Journal:

Journal of Molecular Biology

Année:

2006

Langue:

english

Fichier:

PDF, 370 KB

english, 2006

8

Natural Selection for Kinetic Stability Is a Likely Origin of Correlations between Mutational Effects on Protein Energetics and Frequencies of Amino Acid Occurrences in Sequence Alignments

Raquel Godoy-Ruiz, Fernando Ariza, David Rodriguez-Larrea, Raul Perez-Jimenez, Beatriz Ibarra-Molero, Jose M. Sanchez-Ruiz

Journal:

Journal of Molecular Biology

Année:

2006

Langue:

english

Fichier:

PDF, 702 KB

english, 2006

9

Between-Species Variation in the Kinetic Stability of TIM Proteins Linked to Solvation-Barrier Free Energies

Miguel Costas, David Rodríguez-Larrea, Leonardo De Maria, Torben V. Borchert, Armando Gómez-Puyou, Jose M. Sanchez-Ruiz

Journal:

Journal of Molecular Biology

Année:

2009

Langue:

english

Fichier:

PDF, 590 KB

english, 2009

10

Proteolytic Scanning Calorimetry: A Novel Methodology that Probes the Fundamental Features of Protein Kinetic Stability

Tur-Arlandis, Gema, Rodriguez-Larrea, David, Ibarra-Molero, Beatriz, Sanchez-Ruiz, Jose M.

Journal:

Biophysical Journal

Année:

2010

Langue:

english

Fichier:

PDF, 153 KB

english, 2010

11

Energetic and Structural Consequences of Desolvation/Solvation Barriers to Protein Folding/Unfolding Assessed from Experimental Unfolding Rates

Rodriguez-Larrea, David, Ibarra-Molero, Beatriz, Sanchez-Ruiz, Jose M.

Journal:

Biophysical Journal

Année:

2006

Langue:

english

Fichier:

PDF, 140 KB

english, 2006

12

Multistep protein unfolding during nanopore translocation

Rodriguez-Larrea, David, Bayley, Hagan

Journal:

Nature Nanotechnology

Année:

2013

Langue:

english

Fichier:

PDF, 1.08 MB

english, 2013

13

Single-molecule site-specific detection of protein phosphorylation with a nanopore

Rosen, Christian B, Rodriguez-Larrea, David, Bayley, Hagan

Journal:

Nature Biotechnology

Année:

2014

Langue:

english

Fichier:

PDF, 690 KB

english, 2014

14

Super-proteins From Fitness-threshold Selection Statistics

Rodriguez-Larrea, David, Perez-Jimenez, Raul, Sanchez-Romero, Inmaculada, Arco-Gonzalez, Rocio, Delgado, Asuncion, Fernandez, Julio M., Sanchez-Ruiz, Josè Manuel

Journal:

Biophysical Journal

Année:

2009

Langue:

english

Fichier:

PDF, 36 KB

english, 2009

15

Modulation of Buried Ionizable Groups in Proteins with Engineered Surface Charge

Pey, Angel L., Rodriguez-Larrea, David, Gavira, Jose A., Garcia-Moreno, Bertrand, Sanchez-Ruiz, Jose M.

Journal:

Journal of the American Chemical Society

Année:

2010

Langue:

english

Fichier:

PDF, 626 KB

english, 2010

16

Protein co-translocational unfolding depends on the direction of pulling

Rodriguez-Larrea, David, Bayley, Hagan

Journal:

Nature Communications

Année:

2014

Langue:

english

Fichier:

PDF, 820 KB

english, 2014

17

Role of conservative mutations in protein multi-property adaptation

Rodriguez-Larrea, David, Perez-Jimenez, Raul, Sanchez-Romero, Inmaculada, Delgado-Delgado, Asuncion, Fernandez, Julio M., Sanchez-Ruiz, Jose M.

Journal:

Biochemical Journal

Année:

2010

Langue:

english

Fichier:

PDF, 942 KB

english, 2010

18

Label-Free, Multiplexed, Single-Molecule Analysis of Protein-DNA Complexes with Nanopores

Celaya, Garbiñe, Perales-Calvo, Judit, Muga, Arturo, Moro, Fernando, Rodriguez-Larrea, David

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 1.17 MB

english, 2017

19

DNA-binding miniproteins based on zinc fingers. Assessment of the interaction using nanopores

Rodríguez, Jéssica, Learte-Aymamí, Soraya, Mosquera, Jesús, Celaya, Garbiñe, Rodríguez-Larrea, David, Vázquez, M. Eugenio, Mascareñas, José L.

Journal:

Chemical Science

Année:

2018

Langue:

english

Fichier:

PDF, 1.45 MB

english, 2018

20

Transmembrane protein rotaxanes reveal kinetic traps in the refolding of translocated substrates

Feng, Jianfei, Martin-Baniandres, Pablo, Booth, Michael J., Veggiani, Gianluca, Howarth, Mark, Bayley, Hagan, Rodriguez-Larrea, David

Journal:

Communications Biology

Année:

2020

Fichier:

PDF, 1.83 MB

2020